WRAP Data Freeze - "APG" RiskScore Explanation

This is the explanation of the "APG" RiskScore field.

Descriptions of APOE_RiskScore variable:

A risk score based on the apolipoprotein E (APOE) gene was calculated, with a
higher risk score indicating having a higher amount of genetic risk for Alzheimer’s
disease (Darst, et al. in review). APOE was coded by the e2/e3/e4 genotype formed
by rs7412 and rs429358. Risk due to APOE status was calculated according to the odds
ratio (OR) of the e2/e3/e4 genotype, as indicated in the meta-analysis of APOE
genotype frequencies in studies reported in AlzGene[1]. These ORs were based on studies of
Caucasian individuals and were calculated using the e2/e2 genotype as the reference
(e2/e2 OR=1) as follows: e2/e3 OR=1.38, e3/e3 OR=2.00, e2/e4 OR=4.45, e3/e4 OR=6.78,
e4/e4 OR=25.84.

Note that the 'APOE_RiskScore' reported here is the natural logarithm (ln) of
the OR.

Document History
Version Date Effective Date Change Reason Primary Author
August 6, 2020 Original  Allen Wenzel
April 1, 2020 Committee updates/page reorg Ian Canovi


Keywords:
riskscore, apoe, apolipoprotein, apg 
Doc ID:
104729
Owned by:
Dan P. in Wisconsin Alzheimer’s Program
Created:
2020-08-06
Updated:
2024-07-22
Sites:
Wisconsin Alzheimer’s Program